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stard7 StAR related lipid transfer domain containing 7 [ Danio rerio (zebrafish) ]

Gene ID: 564572, updated on 9-Dec-2024

Summary

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Official Symbol
stard7provided by ZNC
Official Full Name
StAR related lipid transfer domain containing 7provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-2310
See related
Ensembl:ENSDARG00000074858 AllianceGenome:ZFIN:ZDB-GENE-030131-2310
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fc04a02; wu:fc04a02; si:dkey-200l5.5
Summary
Predicted to enable lipid binding activity. Predicted to act upstream of or within lipid transport. Human ortholog(s) of this gene implicated in familial adult myoclonic epilepsy 2. Orthologous to human STARD7 (StAR related lipid transfer domain containing 7). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
human mouse all
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Genomic context

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See stard7 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (17700015..17711304, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (17742581..17753892, complement)

Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene developmentally regulated GTP binding protein 1 Neighboring gene microRNA 218b Neighboring gene solute carrier family 20 member 1b Neighboring gene si:dkey-200l5.4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  3. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within lipid transport IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
stAR-related lipid transfer protein 7, mitochondrial
Names
StAR-related lipid transfer (START) domain containing 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007121.7 Reference GRCz11 Primary Assembly

    Range
    17700015..17711304 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_687902.9 → XP_692994.3  stAR-related lipid transfer protein 7, mitochondrial

    UniProtKB/TrEMBL
    A0A8N7UVX5
    Related
    ENSDARP00000122941.1, ENSDART00000147553.2
    Conserved Domains (1) summary
    cd08911
    Location:175 → 362
    START_STARD7-like; Lipid-binding START domain of mammalian STARD7 and related proteins
Nucleotide Protein Strain
Heading Accession and Version

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