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fam114a2 family with sequence similarity 114 member A2 [ Danio rerio (zebrafish) ]

Gene ID: 563599, updated on 9-Dec-2024

Summary

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Official Symbol
fam114a2provided by ZNC
Official Full Name
family with sequence similarity 114 member A2provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-6308
See related
Ensembl:ENSDARG00000079508 AllianceGenome:ZFIN:ZDB-GENE-030131-6308
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fi43h01; wu:fi43h01; si:dkey-13f9.5
Summary
Orthologous to human FAM114A2 (family with sequence similarity 114 member A2). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
human mouse all
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Genomic context

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See fam114a2 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 21 NC_007132.7 (37423396..37435559, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 21 NC_007132.6 (37738209..37750436, complement)

Chromosome 21 - NC_007132.7Genomic Context describing neighboring genes Neighboring gene nuclear receptor binding SET domain protein 1b Neighboring gene mitochondrial ribosomal protein S17 Neighboring gene progesterone receptor membrane component 1 Neighboring gene transfer RNA leucine (anticodon CAA)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
protein FAM114A2
Names
family with sequence similarity 114, member A2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007132.7 Reference GRCz11 Primary Assembly

    Range
    37423396..37435559 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017352977.3 → XP_017208466.1  protein FAM114A2

    UniProtKB/TrEMBL
    A0A8M6YX33, E9QJA6
    Conserved Domains (1) summary
    pfam05334
    Location:91 → 263
    DUF719; Protein of unknown function (DUF719)

  2. XM_001923081.7 → XP_001923116.1  protein FAM114A2

    UniProtKB/TrEMBL
    A0A8M6YX33, E9QJA6
    Related
    ENSDARP00000120692.2, ENSDART00000133585.3
    Conserved Domains (1) summary
    pfam05334
    Location:91 → 263
    DUF719; Protein of unknown function (DUF719)

  3. XM_021469226.2 → XP_021324901.1  protein FAM114A2

    UniProtKB/TrEMBL
    A0A8M6YX33, E9QJA6
    Conserved Domains (1) summary
    pfam05334
    Location:91 → 263
    DUF719; Protein of unknown function (DUF719)

  4. XM_017352976.3 → XP_017208465.1  protein FAM114A2

    UniProtKB/TrEMBL
    A0A8M6YX33, E9QJA6
    Conserved Domains (1) summary
    pfam05334
    Location:91 → 263
    DUF719; Protein of unknown function (DUF719)
Nucleotide Protein Strain
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