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lyrm9 LYR motif containing 9 [ Danio rerio (zebrafish) ]

Gene ID: 563525, updated on 4-Jan-2025

Summary

Official Symbol
lyrm9provided by ZNC
Official Full Name
LYR motif containing 9provided by ZNC
Primary source
ZFIN:ZDB-GENE-081022-28
See related
Ensembl:ENSDARG00000075528 AllianceGenome:ZFIN:ZDB-GENE-081022-28
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:193694; zgc:193700
Summary
Orthologous to human LYRM9 (LYR motif containing 9). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See lyrm9 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 15 NC_007126.7 (30310835..30311953)
105 previous assembly GRCz10 (GCF_000002035.5) 15 NC_007126.6 (30430094..30431212)

Chromosome 15 - NC_007126.7Genomic Context describing neighboring genes Neighboring gene nuclear FMR1 interacting protein 2 Neighboring gene uncharacterized LOC137487766 Neighboring gene nemo-like kinase, type 2 Neighboring gene nitric oxide synthase 2b, inducible Neighboring gene mitochondrial ribosomal protein S23

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
LYR motif-containing protein 9
Names
UPF0631 protein C17orf108 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001159983.2NP_001153455.1  LYR motif-containing protein 9

    See identical proteins and their annotated locations for NP_001153455.1

    Status: VALIDATED

    Source sequence(s)
    BX649531, EH552928, EH574050
    UniProtKB/Swiss-Prot
    B3DFV0
    Related
    ENSDARP00000100356.2, ENSDART00000112784.4
    Conserved Domains (1) summary
    pfam13232
    Location:1170
    Complex1_LYR_1; Complex1_LYR-like

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007126.7 Reference GRCz11 Primary Assembly

    Range
    30310835..30311953
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)