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pex11g peroxisomal biogenesis factor 11 gamma [ Danio rerio (zebrafish) ]

Gene ID: 563203, updated on 9-Dec-2024

Summary

Official Symbol
pex11gprovided by ZNC
Official Full Name
peroxisomal biogenesis factor 11 gammaprovided by ZNC
Primary source
ZFIN:ZDB-GENE-050913-79
See related
Ensembl:ENSDARG00000025559 AllianceGenome:ZFIN:ZDB-GENE-050913-79
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:114079
Summary
Predicted to be involved in peroxisome fission. Predicted to be located in membrane. Predicted to be active in peroxisomal membrane. Orthologous to human PEX11G (peroxisomal biogenesis factor 11 gamma). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See pex11g in Genome Data Viewer
Location:
chromosome: 11
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 11 NC_007122.7 (5554163..5563498, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 11 NC_007122.6 (5607857..5617192, complement)

Chromosome 11 - NC_007122.7Genomic Context describing neighboring genes Neighboring gene solute carrier family 35 member E1 Neighboring gene si:ch73-40i7.2 Neighboring gene si:ch73-40i7.5 Neighboring gene ATP-binding cassette, sub-family A (ABC1), member 7

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Clone Names

  • MGC114079

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in peroxisome fission IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within peroxisome fission IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in peroxisomal membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
peroxisomal membrane protein 11C

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030172.1NP_001025343.1  peroxisomal membrane protein 11C

    See identical proteins and their annotated locations for NP_001025343.1

    Status: PROVISIONAL

    Source sequence(s)
    BC097141
    UniProtKB/TrEMBL
    Q4V8Z0
    Related
    ENSDARP00000149350.1, ENSDART00000160835.2
    Conserved Domains (1) summary
    pfam05648
    Location:5231
    PEX11; Peroxisomal biogenesis factor 11 (PEX11)

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007122.7 Reference GRCz11 Primary Assembly

    Range
    5554163..5563498 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)