U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

si:ch211-113p18.3 si:ch211-113p18.3 [ Danio rerio (zebrafish) ]

Gene ID: 559644, updated on 9-Dec-2024

Summary

Go to the top of the page Help
Official Symbol
si:ch211-113p18.3provided by ZNC
Official Full Name
si:ch211-113p18.3provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-4983
See related
Ensembl:ENSDARG00000087835 AllianceGenome:ZFIN:ZDB-GENE-030131-4983
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fe17a11; wu:fe17a11
Summary
Predicted to enable DNA binding activity and metal ion binding activity. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See si:ch211-113p18.3 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 15 NC_007126.7 (8314929..8319983, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 15 NC_007126.6 (8338861..8344039, complement)

Chromosome 15 - NC_007126.7Genomic Context describing neighboring genes Neighboring gene BTB and CNC homology 1, basic leucine zipper transcription factor 1 a Neighboring gene mitochondrial intermediate peptidase a Neighboring gene tumor necrosis factor receptor superfamily, member 19 Neighboring gene egl-9 family hypoxia-inducible factor 2 Neighboring gene transmembrane protein 160

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein si:ch211-113p18.3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007126.7 Reference GRCz11 Primary Assembly

    Range
    8314929..8319983 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_700376.9 → XP_705468.3  uncharacterized protein si:ch211-113p18.3

    UniProtKB/TrEMBL
    A0A8N7T8E4
    Related
    ENSDARP00000116673.1, ENSDART00000137552.2
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools