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bcl2l13 BCL2 like 13 [ Danio rerio (zebrafish) ]

Gene ID: 559355, updated on 4-Jan-2025

Summary

Official Symbol
bcl2l13provided by ZNC
Official Full Name
BCL2 like 13provided by ZNC
Primary source
ZFIN:ZDB-GENE-050419-215
See related
Ensembl:ENSDARG00000062370 AllianceGenome:ZFIN:ZDB-GENE-050419-215
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:ch211-238n5.7
Summary
Predicted to act upstream of or within apoptotic process and regulation of apoptotic process. Predicted to be active in membrane. Orthologous to human BCL2L13 (BCL2 like 13). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See bcl2l13 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (20581806..20608273, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (20592817..20619273, complement)

Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene WEE2 oocyte meiosis inhibiting kinase Neighboring gene BH3 interacting domain death agonist Neighboring gene wingless-type MMTV integration site family member 2 Neighboring gene ankyrin repeat, SAM and basic leucine zipper domain containing 1

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Process Evidence Code Pubs
acts_upstream_of_or_within apoptotic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
bcl-2-like protein 13
Names
BCL2-like 13 (apoptosis facilitator)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001044891.2NP_001038356.1  bcl-2-like protein 13

    See identical proteins and their annotated locations for NP_001038356.1

    Status: PROVISIONAL

    Source sequence(s)
    BC139852
    UniProtKB/TrEMBL
    F6NNU3, Q1LX53
    Related
    ENSDARP00000084589.3, ENSDART00000090156.5
    Conserved Domains (1) summary
    pfam00452
    Location:108195
    Bcl-2; Apoptosis regulator proteins, Bcl-2 family

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007129.7 Reference GRCz11 Primary Assembly

    Range
    20581806..20608273 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005159108.5XP_005159165.1  bcl-2-like protein 13 isoform X1

    See identical proteins and their annotated locations for XP_005159165.1

    UniProtKB/TrEMBL
    F6NNU3, Q1LX53
    Related
    ENSDARP00000120878.1, ENSDART00000140632.3
    Conserved Domains (1) summary
    pfam00452
    Location:108195
    Bcl-2; Apoptosis regulator proteins, Bcl-2 family

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018395022.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    182105..206257 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)