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si:dkey-73n10.1 si:dkey-73n10.1 [ Danio rerio (zebrafish) ]

Gene ID: 558609, updated on 9-Dec-2024

Summary

Official Symbol
si:dkey-73n10.1provided by ZNC
Official Full Name
si:dkey-73n10.1provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-9311
See related
Ensembl:ENSDARG00000069168 AllianceGenome:ZFIN:ZDB-GENE-030131-9311
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fj65a11; wu:fj65a11
Summary
Orthologous to human C15orf39 (chromosome 15 open reading frame 39). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See si:dkey-73n10.1 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (18931484..18942110, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (18942294..18953073, complement)

Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110438119 Neighboring gene ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila) Neighboring gene phosphopantothenoylcysteine decarboxylase Neighboring gene 3-hydroxyacyl-CoA dehydratase 3 Neighboring gene integrator complex subunit 14

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
si:dkey-73n10.1; uncharacterized protein C15orf39 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007129.7 Reference GRCz11 Primary Assembly

    Range
    18931484..18942110 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021467796.2XP_021323471.1  uncharacterized protein C15orf39 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8M1RMQ0, A0A8M9PMH8, F1QGJ6
    Related
    ENSDARP00000091231.4, ENSDART00000100458.5
  2. XM_021467795.2XP_021323470.1  uncharacterized protein C15orf39 homolog isoform X2

    UniProtKB/TrEMBL
    A0A8M1RMQ0, A0A8M9PQR5

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018395020.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    213453..223787 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005159151.5XP_005159208.2  uncharacterized protein C15orf39 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8M1RMQ0, A0A8M2B623
  2. XM_021473272.2XP_021328947.1  uncharacterized protein C15orf39 homolog isoform X3

    UniProtKB/TrEMBL
    A0A8M1RMQ0, A0A8M9PD12