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lad1 ladinin [ Danio rerio (zebrafish) ]

Gene ID: 558327, updated on 4-Jan-2025

Summary

Official Symbol
lad1provided by ZNC
Official Full Name
ladininprovided by ZNC
Primary source
ZFIN:ZDB-GENE-030616-268
See related
Ensembl:ENSDARG00000022698 AllianceGenome:ZFIN:ZDB-GENE-030616-268
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
wu:fj29e04; si:dz65i4.2; si:dz182n13.6
Summary
Predicted to enable structural molecule activity. Is expressed in neuromast. Orthologous to human LAD1 (ladinin 1). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See lad1 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 23 NC_007134.7 (5687972..5719471, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 23 NC_007134.6 (5754000..5785528, complement)

Chromosome 23 - NC_007134.7Genomic Context describing neighboring genes Neighboring gene plakophilin-1 Neighboring gene uncharacterized LOC101884546 Neighboring gene troponin T type 2a (cardiac) Neighboring gene troponin I type 1a (skeletal, slow) Neighboring gene finTRIM family, member 57

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001386486.1NP_001373415.1  ladinin-1

    Status: VALIDATED

    Source sequence(s)
    CU928303
    UniProtKB/TrEMBL
    A0A8N7TDE8
    Related
    ENSDARP00000030814.6, ENSDART00000033093.7

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007134.7 Reference GRCz11 Primary Assembly

    Range
    5687972..5719471 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)