zgc:153738 zgc:153738 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: zgc:153738provided by ZNC
Official Full Name: zgc:153738provided by ZNC
Primary source: ZFIN:ZDB-GENE-061013-622
See related: Ensembl:ENSDARG00000069230 AllianceGenome:ZFIN:ZDB-GENE-061013-622
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary: Predicted to enable ATP binding activity and ATP hydrolysis activity. Predicted to be involved in anatomical structure morphogenesis. Orthologous to several human genes including IQCA1 (IQ motif containing with AAA domain 1). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs: all
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Genomic context

Location:: chromosome: 8

Exon count:: 21

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	8	NC_007119.7 (18450052..18500189, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	8	NC_007119.6 (18414343..18425079, complement)

Chromosome 8 - NC_007119.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info
enables ATP hydrolysis activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in anatomical structure morphogenesis	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: uncharacterized protein LOC558115

Names: IQ and AAA domain-containing protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001079968.3 → NP_001073437.3 uncharacterized protein LOC558115

Status: VALIDATED

Source sequence(s)

AL844185

UniProtKB/TrEMBL

A0A8N7UYH5, A5PF14

Related

ENSDARP00000105398.2, ENSDART00000129535.4

Conserved Domains (2) summary

COG0464
Location:557 → 769

SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]

pfam00004
Location:559 → 692

AAA; ATPase family associated with various cellular activities (AAA)