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zgc:194930 zgc:194930 [ Danio rerio (zebrafish) ]

Gene ID: 557813, updated on 3-Dec-2024

Summary

Official Symbol
zgc:194930provided by ZNC
Official Full Name
zgc:194930provided by ZNC
Primary source
ZFIN:ZDB-GENE-081022-166
See related
Ensembl:ENSDARG00000079584 AllianceGenome:ZFIN:ZDB-GENE-081022-166
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
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Genomic context

See zgc:194930 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (61184513..61224176)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (60874389..60908075)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137496232 Neighboring gene NACHT and WD repeat domain containing 2 Neighboring gene RELT like 1 Neighboring gene RWD domain containing 4

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC557813

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001130770.2NP_001124242.2  uncharacterized protein LOC557813

    Status: VALIDATED

    Source sequence(s)
    AL935029, AL935143
    UniProtKB/TrEMBL
    B3DK86
    Related
    ENSDARP00000098907.2, ENSDART00000110671.4

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    61184513..61224176
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)