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zgc:162928 zgc:162928 [ Danio rerio (zebrafish) ]

Gene ID: 557144, updated on 9-Dec-2024

Summary

Official Symbol
zgc:162928provided by ZNC
Official Full Name
zgc:162928provided by ZNC
Primary source
ZFIN:ZDB-GENE-070410-112
See related
Ensembl:ENSDARG00000095034 AllianceGenome:ZFIN:ZDB-GENE-070410-112
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Orthologous to human C8orf34 (chromosome 8 open reading frame 34). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See zgc:162928 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (19210067..19402794)
105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (19065654..19258375)

Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene carboxypeptidase A6 Neighboring gene phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 Neighboring gene sulfatase 1 Neighboring gene solute carrier organic anion transporter family member 5A1

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
uncharacterized protein C8orf34 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001430954.1NP_001417883.1  uncharacterized protein C8orf34 homolog

    Status: VALIDATED

    Source sequence(s)
    CR354607, CR384092
    UniProtKB/TrEMBL
    A0A286Y8T7, A0A8M2B9S4
    Related
    ENSDARP00000143589.1, ENSDART00000179373.2

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007135.7 Reference GRCz11 Primary Assembly

    Range
    19210067..19402794
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005162707.5XP_005162764.1  uncharacterized protein C8orf34 homolog isoform X1

    UniProtKB/TrEMBL
    A0A286Y8T7, A0A8M2B9L9, A0A8M2B9S4

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001089499.1: Suppressed sequence

    Description
    NM_001089499.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.