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tmem177 transmembrane protein 177 [ Danio rerio (zebrafish) ]

Gene ID: 556875, updated on 9-Dec-2024

Summary

Official Symbol
tmem177provided by ZNC
Official Full Name
transmembrane protein 177provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-993
See related
Ensembl:ENSDARG00000069301 AllianceGenome:ZFIN:ZDB-GENE-030131-993
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fb55d01; zgc:73384; wu:fb55d01
Summary
Predicted to be located in mitochondrial inner membrane. Predicted to be active in membrane. Orthologous to human TMEM177 (transmembrane protein 177). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See tmem177 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (29034221..29039470, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (29223475..29228724, complement)

Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137490688 Neighboring gene erythrocyte membrane protein band 4.1 like 5 Neighboring gene protein tyrosine phosphatase non-receptor type 4a Neighboring gene muscle RAS oncogene homolog a Neighboring gene parathyroid hormone 2 receptor a Neighboring gene uncharacterized LOC137496477

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Clone Names

  • MGC73384

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial inner membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_199594.1NP_955888.1  transmembrane protein 177

    See identical proteins and their annotated locations for NP_955888.1

    Status: PROVISIONAL

    Source sequence(s)
    BC059692
    UniProtKB/Swiss-Prot
    Q6PBI8
    Related
    ENSDARP00000091517.3, ENSDART00000100744.4

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007120.7 Reference GRCz11 Primary Assembly

    Range
    29034221..29039470 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_2

Genomic

  1. NW_018395284.1 Reference GRCz11 ALT_DRER_TU_2

    Range
    303839..309114 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)