nkapd1 NKAP domain containing 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: nkapd1provided by ZNC
Official Full Name: NKAP domain containing 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-070410-76
See related: Ensembl:ENSDARG00000016724 AllianceGenome:ZFIN:ZDB-GENE-070410-76
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:162339
Summary: Orthologous to human NKAPD1 (NKAP domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 15

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	15	NC_007126.7 (21711673..21716203)
105	previous assembly	GRCz10 (GCF_000002035.5)	15	NC_007126.6 (21772170..21780629)

Chromosome 15 - NC_007126.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help

See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

Go to the top of the page Help

Preferred Names: uncharacterized protein NKAPD1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001160409.1 → NP_001153881.1 uncharacterized protein NKAPD1

See identical proteins and their annotated locations for NP_001153881.1

Status: PROVISIONAL

Source sequence(s)

BC139569

UniProtKB/TrEMBL

A0A8M9QLE9, A4QNY5

Related

ENSDARP00000115814.1, ENSDART00000136151.2

Conserved Domains (1) summary

pfam15692
Location:79 → 120

NKAP; NF-kappa-B-activating protein

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007126.7 Reference GRCz11 Primary Assembly

Range

21711673..21716203

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_021481416.2 → XP_021337091.1 uncharacterized protein NKAPD1 isoform X1

UniProtKB/TrEMBL

A0A8M9QLE9, A4QNY5

Related

ENSDARP00000154849.1, ENSDART00000192553.1

Conserved Domains (1) summary

pfam15692
Location:79 → 120

NKAP; NF-kappa-B-activating protein