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fbxo28 F-box protein 28 [ Danio rerio (zebrafish) ]

Gene ID: 556288, updated on 4-Jan-2025

Summary

Official Symbol
fbxo28provided by ZNC
Official Full Name
F-box protein 28provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-4665
See related
Ensembl:ENSDARG00000027159 AllianceGenome:ZFIN:ZDB-GENE-030131-4665
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fd49h06; wu:fd49h06; si:ch211-178h7.5
Summary
Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 100. Orthologous to human FBXO28 (F-box protein 28). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See fbxo28 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 13 NC_007124.7 (482806..491915)
105 previous assembly GRCz10 (GCF_000002035.5) 13 NC_007124.6 (352515..361624)

Chromosome 13 - NC_007124.7Genomic Context describing neighboring genes Neighboring gene EGF containing fibulin extracellular matrix protein 1 Neighboring gene HEAT repeat containing 5B Neighboring gene delta(4)-desaturase, sphingolipid 1 Neighboring gene nuclear VCP like

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001327835.1NP_001314764.1  F-box only protein 28

    Status: VALIDATED

    Source sequence(s)
    BX005147, CU570800
    UniProtKB/TrEMBL
    A0A8M1P937
    Related
    ENSDARP00000119405.1, ENSDART00000134884.2

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007124.7 Reference GRCz11 Primary Assembly

    Range
    482806..491915
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)