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si:ch211-197g15.5 si:ch211-197g15.5 [ Danio rerio (zebrafish) ]

Gene ID: 555512, updated on 3-Dec-2024

Summary

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Official Symbol
si:ch211-197g15.5provided by ZNC
Official Full Name
si:ch211-197g15.5provided by ZNC
Primary source
ZFIN:ZDB-GENE-050208-536
See related
Ensembl:ENSDARG00000009673 AllianceGenome:ZFIN:ZDB-GENE-050208-536
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
ifi44f6
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Genomic context

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See si:ch211-197g15.5 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (17493170..17499863, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (17468101..17474921, complement)

Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene interferon induced protein 44f4 Neighboring gene interferon-induced protein 44f5 Neighboring gene RAB11B, member RAS oncogene family, a Neighboring gene membrane-associated ring finger (C3HC4) 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
si:ch211-197g15.5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001423248.1 → NP_001410177.1  si:ch211-197g15.5

    Status: VALIDATED

    Source sequence(s)
    BX649327
    UniProtKB/TrEMBL
    A0A8M9PDZ3
    Related
    ENSDARP00000096233.4, ENSDART00000105460.5

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007133.7 Reference GRCz11 Primary Assembly

    Range
    17493170..17499863 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068216295.1 → XP_068072396.1  si:ch211-197g15.5 isoform X1

    UniProtKB/TrEMBL
    A0A8M9PDZ3
Nucleotide Protein Strain
Heading Accession and Version

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