U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

si:ch211-197g15.9 si:ch211-197g15.9 [ Danio rerio (zebrafish) ]

Gene ID: 555440, updated on 9-Dec-2024

Summary

Official Symbol
si:ch211-197g15.9provided by ZNC
Official Full Name
si:ch211-197g15.9provided by ZNC
Primary source
ZFIN:ZDB-GENE-050208-616
See related
Ensembl:ENSDARG00000002293 AllianceGenome:ZFIN:ZDB-GENE-050208-616
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
ifi44f2
Summary
Predicted to enable GTP binding activity. Orthologous to several human genes including IFI44L (interferon induced protein 44 like). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See si:ch211-197g15.9 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (17460432..17464186, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (17435557..17438859, complement)

Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene RAB GTPase activating protein 1-like Neighboring gene G protein-coupled receptor 52 Neighboring gene interferon induced protein 44f1 Neighboring gene interferon induced protein 44f3 Neighboring gene interferon induced protein 44f4

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
interferon-induced protein 44-like

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007133.7 Reference GRCz11 Primary Assembly

    Range
    17460432..17464186 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021469588.2XP_021325263.1  interferon-induced protein 44-like isoform X1

    UniProtKB/TrEMBL
    A0A8M1RJI1, F6PCD2
    Conserved Domains (2) summary
    cd00882
    Location:216403
    Ras_like_GTPase; Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases)
    pfam07534
    Location:39166
    TLD; TLD
  2. XM_009296334.4XP_009294609.1  interferon-induced protein 44-like isoform X2

    UniProtKB/TrEMBL
    A0A8M3AMC1
    Related
    ENSDARP00000135188.2, ENSDART00000160415.2
    Conserved Domains (3) summary
    cd00882
    Location:216365
    Ras_like_GTPase; Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases)
    cl02144
    Location:39166
    TLD; TLD
    cl21455
    Location:152279
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
  3. XM_068216448.1XP_068072549.1  interferon-induced protein 44-like isoform X1

    UniProtKB/TrEMBL
    A0A8M1RJI1, F6PCD2
    Related
    ENSDARP00000096228.5, ENSDART00000105455.6