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ubald1b UBA-like domain containing 1b [ Danio rerio (zebrafish) ]

Gene ID: 553697, updated on 4-Jan-2025

Summary

Official Symbol
ubald1bprovided by ZNC
Official Full Name
UBA-like domain containing 1bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-050522-446
See related
Ensembl:ENSDARG00000020976 AllianceGenome:ZFIN:ZDB-GENE-050522-446
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fam100ab; zgc:112270; zgc:136362
Summary
Orthologous to human UBALD1 (UBA like domain containing 1). [provided by Alliance of Genome Resources, Jan 2025]
Annotation information
Annotation category: partial on reference assembly
Orthologs
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Genomic context

See ubald1b in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (54836428..54846408, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (54581826..54591806, complement)

Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene si:ch211-74m13.1 Neighboring gene intercellular adhesion molecule 2 Neighboring gene mahogunin, ring finger 1b Neighboring gene arylalkylamine N-acetyltransferase 2

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Clone Names

  • MGC112270, MGC136362

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
UBA-like domain-containing protein 1b
Names
family with sequence similarity 100, member Ab

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001020671.2NP_001018507.2  UBA-like domain-containing protein 1b

    See identical proteins and their annotated locations for NP_001018507.2

    Status: PROVISIONAL

    Source sequence(s)
    BC116518
    UniProtKB/TrEMBL
    Q1JQ18
    Related
    ENSDARP00000068499.4, ENSDART00000074010.6
    Conserved Domains (1) summary
    cd14343
    Location:644
    UBA_F100B_like; UBA-like domain found in protein FAM100B

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007114.7 Reference GRCz11 Primary Assembly

    Range
    54836428..54846408 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)