necap2 NECAP endocytosis associated 2 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: necap2provided by ZNC
Official Full Name: NECAP endocytosis associated 2provided by ZNC
Primary source: ZFIN:ZDB-GENE-050522-67
See related: Ensembl:ENSDARG00000046002 AllianceGenome:ZFIN:ZDB-GENE-050522-67
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:110468
Summary: Predicted to be involved in vesicle-mediated transport. Predicted to act upstream of or within endocytosis. Predicted to be located in membrane. Predicted to be part of clathrin vesicle coat. Orthologous to human NECAP2 (NECAP endocytosis associated 2). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs: all
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Genomic context

Location:: chromosome: 22

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	22	NC_007133.7 (341990..347412, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	22	NC_007133.6 (337343..342765, complement)

Chromosome 22 - NC_007133.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

G41750 (e-PCR)
- UniSTS:38165

fl05f06.x1 (e-PCR)
- UniSTS:201902

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within endocytosis	IEA Inferred from Electronic Annotation more info
involved_in vesicle-mediated transport	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
part_of clathrin vesicle coat	IBA Inferred from Biological aspect of Ancestor more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: adaptin ear-binding coat-associated protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001243164.1 → NP_001230093.1 adaptin ear-binding coat-associated protein 2

Status: VALIDATED

Source sequence(s)

BC078360, CU914780

UniProtKB/TrEMBL

A0A8M1P218, F1RAQ5, Q6DBU3

Related

ENSDARP00000067632.5, ENSDART00000067633.7

Conserved Domains (1) summary

pfam07933
Location:9 → 166

DUF1681; Protein of unknown function (DUF1681)