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lin37 lin-37 DREAM MuvB core complex component [ Danio rerio (zebrafish) ]

Gene ID: 550587, updated on 9-Dec-2024

Summary

Official Symbol
lin37provided by ZNC
Official Full Name
lin-37 DREAM MuvB core complex componentprovided by ZNC
Primary source
ZFIN:ZDB-GENE-050417-446
See related
Ensembl:ENSDARG00000053950 AllianceGenome:ZFIN:ZDB-GENE-050417-446
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fa95f12; wu:fa95f12; wu:fv61g04; zgc:110627
Summary
Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to be part of Myb complex. Orthologous to human LIN37 (lin-37 DREAM MuvB core complex component). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See lin37 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 15 NC_007126.7 (37589758..37599680)
105 previous assembly GRCz10 (GCF_000002035.5) 15 NC_007126.6 (37688173..37698093)

Chromosome 15 - NC_007126.7Genomic Context describing neighboring genes Neighboring gene presenilin enhancer, gamma-secretase subunit Neighboring gene heat shock protein, alpha-crystallin-related, b6 Neighboring gene proline and serine rich 3 Neighboring gene si:ch211-137j23.9 Neighboring gene chemerin-like receptor 1

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
part_of Myb complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of transcription repressor complex IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
protein lin-37 homolog
Names
lin-37 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001017888.1NP_001017888.1  protein lin-37 homolog

    See identical proteins and their annotated locations for NP_001017888.1

    Status: PROVISIONAL

    Source sequence(s)
    BC092956
    UniProtKB/TrEMBL
    Q567Z3
    Related
    ENSDARP00000070545.4, ENSDART00000076066.7
    Conserved Domains (1) summary
    pfam15306
    Location:81231
    LIN37; LIN37

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007126.7 Reference GRCz11 Primary Assembly

    Range
    37589758..37599680
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068213553.1XP_068069654.1  protein lin-37 homolog isoform X1

    Related
    ENSDARP00000127637.1, ENSDART00000153894.3