U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

tmem184ba transmembrane protein 184ba [ Danio rerio (zebrafish) ]

Gene ID: 550413, updated on 4-Jan-2025

Summary

Go to the top of the page Help
Official Symbol
tmem184baprovided by ZNC
Official Full Name
transmembrane protein 184baprovided by ZNC
Primary source
ZFIN:ZDB-GENE-050417-219
See related
Ensembl:ENSDARG00000045147 AllianceGenome:ZFIN:ZDB-GENE-050417-219
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:112178
Summary
Predicted to be located in membrane. Orthologous to human TMEM184B (transmembrane protein 184B). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See tmem184ba in Genome Data Viewer
Location:
chromosome: 12
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (19320636..19340221)
105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (19198762..19218347)

Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene si:ch211-141o9.10 Neighboring gene trinucleotide repeat containing adaptor 6Ba Neighboring gene casein kinase 1, epsilon Neighboring gene v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F Neighboring gene translocase of outer mitochondrial membrane 22 homolog (yeast)

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. 15000 unique zebrafish EST clusters and their future use in microarray for profiling gene expression patterns during embryogenesis. Lo J, et al. Genome Res, 2003 Mar. PMID 12618376, Free PMC Article
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by ZFIN

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
transmembrane protein 184ba

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001017718.2 → NP_001017718.2  transmembrane protein 184ba

    Status: VALIDATED

    Source sequence(s)
    BX649366
    UniProtKB/TrEMBL
    A0A8M1N5I3, F1QSM8
    Related
    ENSDARP00000090847.4, ENSDART00000100075.6
    Conserved Domains (1) summary
    pfam03619
    Location:59 → 330
    Solute_trans_a; Organic solute transporter Ostalpha

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007123.7 Reference GRCz11 Primary Assembly

    Range
    19320636..19340221
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005156144.5 → XP_005156201.1  transmembrane protein 184ba isoform X1

    UniProtKB/TrEMBL
    A0A8M2B2T9
    Conserved Domains (1) summary
    pfam03619
    Location:60 → 331
    Solute_trans_a; Organic solute transporter Ostalpha

  2. XM_005156146.5 → XP_005156203.1  transmembrane protein 184ba isoform X3

    UniProtKB/TrEMBL
    A0A8M2B262
    Related
    ENSDARP00000066388.5, ENSDART00000066389.5
    Conserved Domains (1) summary
    pfam03619
    Location:60 → 331
    Solute_trans_a; Organic solute transporter Ostalpha

  3. XM_005156145.4 → XP_005156202.1  transmembrane protein 184ba isoform X2

    UniProtKB/TrEMBL
    A0A8M2B280
    Conserved Domains (1) summary
    pfam03619
    Location:59 → 330
    Solute_trans_a; Organic solute transporter Ostalpha

RNA

  1. XR_011017334.1 RNA Sequence

  2. XR_011017335.1 RNA Sequence

Reference GRCz11 ALT_DRER_TU_2

Genomic

  1. NW_018395301.1 Reference GRCz11 ALT_DRER_TU_2

    Range
    556489..576073
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools