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Pcdhb19 protocadherin beta 19 [ Rattus norvegicus (Norway rat) ]

Gene ID: 548106, updated on 4-Jan-2025

Summary

Symbol
Pcdhb19provided by RGD
Full Name
protocadherin beta 19provided by RGD
Primary source
RGD:1549697
See related
AllianceGenome:RGD:1549697
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Orthologous to several human genes including PCDHB12 (protocadherin beta 12). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

See Pcdhb19 in Genome Data Viewer
Location:
18p11
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 18 NC_086036.1 (29478848..29481656)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 18 NC_051353.1 (29204838..29207646)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 18 NC_005117.4 (30572110..30577286)

Chromosome 18 - NC_086036.1Genomic Context describing neighboring genes Neighboring gene protocadherin beta 16 Neighboring gene protocadherin beta 17 Neighboring gene small nucleolar RNA SNORA31 Neighboring gene protocadherin beta 20

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
protocadherin beta-12
Names
protocadherin beta-11

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001408909.2NP_001395838.1  protocadherin beta-12 precursor

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000018
    UniProtKB/TrEMBL
    A6J375

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086036.1 Reference GRCr8

    Range
    29478848..29481656
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001014807.1: Suppressed sequence

    Description
    NM_001014807.1: This RefSeq record was removed by NCBI staff. Contact [email protected] for further information.