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Defb28 defensin beta 28 [ Mus musculus (house mouse) ]

Gene ID: 545475, updated on 4-Jan-2025

Summary

Official Symbol
Defb28provided by MGI
Official Full Name
defensin beta 28provided by MGI
Primary source
MGI:MGI:3650536
See related
Ensembl:ENSMUSG00000074679 AllianceGenome:MGI:3650536
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm1635
Summary
Orthologous to human DEFB115 (defensin beta 115). [provided by Alliance of Genome Resources, Jan 2025]
Expression
Restricted expression toward genital fat pad adult (RPKM 200.0) See more
Orthologs
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Genomic context

See Defb28 in Genome Data Viewer
Location:
2 H1; 2 75.2 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (152360175..152363367)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (152518255..152521447)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene defensin beta 22 Neighboring gene defensin beta 26 Neighboring gene STARR-seq mESC enhancer starr_06063 Neighboring gene defensin beta 29 Neighboring gene predicted gene 14161 Neighboring gene STARR-seq mESC enhancer starr_06064 Neighboring gene predicted gene, 17416

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General protein information

Preferred Names
beta-defensin 115
Names
beta-defensin 28

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001037502.2NP_001032591.1  beta-defensin 115 precursor

    See identical proteins and their annotated locations for NP_001032591.1

    Status: VALIDATED

    Source sequence(s)
    AK131731
    Consensus CDS
    CCDS50751.1
    UniProtKB/TrEMBL
    Q3V2L0
    Related
    ENSMUSP00000112697.2, ENSMUST00000121912.2
    Conserved Domains (1) summary
    pfam13841
    Location:3766
    Defensin_beta_2; Beta defensin

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    152360175..152363367
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)