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Hnrnpa1l2-ps2 heterogeneous nuclear ribonucleoprotein A1-like 2, pseudogene 2 [ Mus musculus (house mouse) ]

Gene ID: 545091, updated on 27-Nov-2024

Summary

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Official Symbol
Hnrnpa1l2-ps2provided by MGI
Official Full Name
heterogeneous nuclear ribonucleoprotein A1-like 2, pseudogene 2provided by MGI
Primary source
MGI:MGI:3645633
See related
Ensembl:ENSMUSG00000021927 AllianceGenome:MGI:3645633
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm5803; EG545091
Summary
Orthologous to human HNRNPA1L2 (heterogeneous nuclear ribonucleoprotein A1 like 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Hnrnpa1l2-ps2 in Genome Data Viewer
Location:
15 A2; 15 8.54 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (22713906..22715070, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (22713820..22714984, complement)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene cadherin 12 Neighboring gene STARR-seq mESC enhancer starr_38121 Neighboring gene STARR-seq mESC enhancer starr_38122 Neighboring gene STARR-seq mESC enhancer starr_38123 Neighboring gene STARR-seq mESC enhancer starr_38124 Neighboring gene predicted gene, 25101 Neighboring gene STARR-seq mESC enhancer starr_38125 Neighboring gene STARR-seq mESC enhancer starr_38126 Neighboring gene STARR-seq mESC enhancer starr_38127 Neighboring gene STARR-seq mESC enhancer starr_38128 Neighboring gene STARR-seq mESC enhancer starr_38129 Neighboring gene STARR-seq mESC enhancer starr_38133 Neighboring gene STARR-seq mESC enhancer starr_38132 Neighboring gene STARR-seq mESC enhancer starr_38134 Neighboring gene STARR-seq mESC enhancer starr_38135 Neighboring gene predicted gene, 41278 Neighboring gene STARR-seq mESC enhancer starr_38138 Neighboring gene STARR-seq mESC enhancer starr_38139 Neighboring gene STARR-seq mESC enhancer starr_38140 Neighboring gene cadherin 18 Neighboring gene STARR-seq mESC enhancer starr_38141 Neighboring gene STARR-seq mESC enhancer starr_38142 Neighboring gene STARR-seq mESC enhancer starr_38144 Neighboring gene STARR-seq mESC enhancer starr_38145 Neighboring gene predicted gene, 19840 Neighboring gene predicted gene, 24656

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC189927

General protein information

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Preferred Names
uncharacterized protein LOC545091

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001165971.1 → NP_001159443.1  uncharacterized protein LOC545091

    See identical proteins and their annotated locations for NP_001159443.1

    Status: VALIDATED

    Source sequence(s)
    BC172092
    UniProtKB/TrEMBL
    Q3TFB1
    Related
    ENSMUST00000022493.7
    Conserved Domains (2) summary
    pfam11627
    Location:257 → 281
    HnRNPA1; Nuclear factor hnRNPA1
    cl17169
    Location:12 → 92
    RRM_SF; RNA recognition motif (RRM) superfamily

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    22713906..22715070 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_005916.3: Suppressed sequence

    Description
    NG_005916.3: This RefSeq was permanently suppressed because there is evidence this locus is transcribed.

  2. NM_001081296.1: Suppressed sequence

    Description
    NM_001081296.1: This RefSeq record was removed by NCBI staff. Contact [email protected] for further information.
Nucleotide Protein Strain
Heading Accession and Version

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