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HCAG_03853 hypothetical protein [ Histoplasma mississippiense (nom. inval.) ]

Gene ID: 5448326, updated on 31-Oct-2024

Summary

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Gene symbol
HCAG_03853
Gene description
hypothetical protein
Locus tag
HCAG_03853
See related
FungiDB:HCAG_03853; VEuPathDB:HCAG_03853
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Histoplasma mississippiense (nom. inval.) (strain: NAm1)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Ajellomycetaceae; Histoplasma; unclassified Histoplasma
Orthologs
Aspergillus fumigatus all
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Genomic context

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See HCAG_03853 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
10

NW_001813980.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001813980.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol deacylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001813980.1 Reference assembly

    Range
    2354800..2361094
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001541705.1 → XP_001541755.1  conserved hypothetical protein [Histoplasma mississippiense (nom. inval.)]

    See identical proteins and their annotated locations for XP_001541755.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A6R2J5
    Conserved Domains (4) summary
    TIGR04095
    Location:49 → 419
    dnd_restrict_1; DNA phosphorothioation system restriction enzyme
    pfam00271
    Location:283 → 382
    Helicase_C; Helicase conserved C-terminal domain
    pfam04851
    Location:49 → 207
    ResIII; Type III restriction enzyme, res subunit
    pfam07819
    Location:772 → 1016
    PGAP1; PGAP1-like protein
Protein Accession Links
GenPept Link UniProtKB Link
EDN07322.1

Gene LinkOut

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Molecular Biology Databases
Research Materials