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HCAG_03825 activator 1 38 kDa subunit [ Histoplasma mississippiense (nom. inval.) ]

Gene ID: 5448324, updated on 31-Oct-2024

Summary

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Gene symbol
HCAG_03825
Gene description
activator 1 38 kDa subunit
Locus tag
HCAG_03825
See related
FungiDB:HCAG_03825; VEuPathDB:HCAG_03825
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Histoplasma mississippiense (nom. inval.) (strain: NAm1)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Ajellomycetaceae; Histoplasma; unclassified Histoplasma
Orthologs
Aspergillus fumigatus all
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Genomic context

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See HCAG_03825 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
6

NW_001813980.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene mitochondrial 54S ribosomal protein YmL47 Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001813980.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA clamp loader activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA-templated DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Ctf18 RFC-like complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of DNA replication factor C complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Elg1 RFC-like complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Rad17 RFC-like complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
activator 1 38 kDa subunit

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001813980.1 Reference assembly

    Range
    2261901..2263302
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001541677.1 → XP_001541727.1  activator 1 38 kDa subunit [Histoplasma mississippiense (nom. inval.)]

    See identical proteins and their annotated locations for XP_001541727.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A6R2G7
    Conserved Domains (1) summary
    PRK00440
    Location:5 → 339
    rfc; replication factor C small subunit; Reviewed
Protein Accession Links
GenPept Link UniProtKB Link
EDN07294.1

Gene LinkOut

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Molecular Biology Databases
Research Materials