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Slc14a2 solute carrier family 14 member 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 54302, updated on 27-Nov-2024

Summary

Official Symbol
Slc14a2provided by RGD
Official Full Name
solute carrier family 14 member 2provided by RGD
Primary source
RGD:3689
See related
EnsemblRapid:ENSRNOG00000061714 AllianceGenome:RGD:3689
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
UrT1-C; UrT1-D; Slc14a2T; Slc14a2_v4; testSymbol
Summary
Enables urea transmembrane transporter activity. Involved in urea transport. Located in apical plasma membrane. Orthologous to human SLC14A2 (solute carrier family 14 member 2). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Restricted expression toward (RPKM 62.8) See more
Orthologs
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Genomic context

See Slc14a2 in Genome Data Viewer
Location:
18q12.3
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 18 NC_086036.1 (73887575..74314546, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 18 NC_051353.1 (71612460..72039462, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 18 NC_005117.4 (74508070..74941389, complement)

Chromosome 18 - NC_086036.1Genomic Context describing neighboring genes Neighboring gene sialic acid binding Ig-like lectin 15 Neighboring gene uncharacterized LOC102553274 Neighboring gene solute carrier family 14 member 1 (Kidd blood group) Neighboring gene uncharacterized LOC102553338 Neighboring gene uncharacterized LOC134483059 Neighboring gene uncharacterized LOC134483060 Neighboring gene U1 spliceosomal RNA

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 
enables cell adhesion molecule binding ISO
Inferred from Sequence Orthology
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables urea transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
enables urea transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables urea transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
enables urea transmembrane transporter activity NAS
Non-traceable Author Statement
more info
PubMed 
Process Evidence Code Pubs
involved_in urea transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in urea transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
involved_in urea transport IDA
Inferred from Direct Assay
more info
PubMed 
involved_in urea transport NAS
Non-traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
located_in apical plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in apical plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in basolateral plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
urea transporter 2
Names
plasma membrane urea transporter
solute carrier family 14 (urea transporter), member 2T
testName
urea transport protein
urea transporter UT-A2c
urea transporter UT-A2d
urea transporter, kidney

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001110270.2NP_001103740.1  urea transporter 2 isoform 3

    See identical proteins and their annotated locations for NP_001103740.1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000018
    UniProtKB/TrEMBL
    A0A120KA92, A6KMY2
    Related
    ENSRNOP00000074116.3, ENSRNOT00000078519.3
    Conserved Domains (1) summary
    pfam03253
    Location:58353
    UT; Urea transporter
  2. NM_019347.4NP_062220.2  urea transporter 2 isoform 1

    See identical proteins and their annotated locations for NP_062220.2

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000018
    UniProtKB/Swiss-Prot
    Q62668, Q9R1Y7, Q9WTT8, Q9Z2R3
    UniProtKB/TrEMBL
    A6KMY1
    Related
    ENSRNOP00000068708.3, ENSRNOT00000079899.3
    Conserved Domains (1) summary
    pfam03253
    Location:590885
    UT; Urea transporter
  3. NM_177962.6NP_808877.2  urea transporter 2 isoform 2

    See identical proteins and their annotated locations for NP_808877.2

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000018
    UniProtKB/TrEMBL
    A0A0G2K6L0, A6KMY3
    Related
    ENSRNOP00000073854.2, ENSRNOT00000078016.3
    Conserved Domains (1) summary
    pfam03253
    Location:127411
    UT; Urea transporter

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086036.1 Reference GRCr8

    Range
    73887575..74314546 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)