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ZBTB11 zinc finger and BTB domain containing 11 [ Bos taurus (domestic cattle) ]

Gene ID: 538545, updated on 30-Jan-2025

Summary

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Official Symbol
ZBTB11provided by VGNC
Official Full Name
zinc finger and BTB domain containing 11provided by VGNC
Primary source
VGNC:VGNC:37059
See related
BGD:BT19152; EnsemblRapid:ENSBTAG00070000698
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See ZBTB11 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 1 NC_037328.1 (46025950..46058876, complement)

Chromosome 1 - NC_037328.1Genomic Context describing neighboring genes Neighboring gene SUMO specific peptidase 7 Neighboring gene tRNA methyltransferase 10C, mitochondrial RNase P subunit Neighboring gene PEST proteolytic signal containing nuclear protein Neighboring gene ribosomal protein L24 Neighboring gene centrosomal protein 97

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037328.1 Chromosome 1 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 11

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001205556.2 → NP_001192485.2  zinc finger and BTB domain-containing protein 11

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000001
    UniProtKB/TrEMBL
    A0AAA9S0W7, E1BBI5
    Related
    ENSBTAP00070000924.1, ENSBTAT00070001573.1
    Conserved Domains (6) summary
    COG5048
    Location:666 → 839
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:669 → 754
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:680 → 700
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:570 → 590
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:204 → 305
    BTB; BTB/POZ domain
    pfam13465
    Location:899 → 922
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037328.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    46025950..46058876 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015470868.3 → XP_015326354.2  zinc finger and BTB domain-containing protein 11 isoform X1

    UniProtKB/TrEMBL
    A0AAA9S0W7
    Conserved Domains (5) summary
    COG5189
    Location:669 → 754
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:680 → 700
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:570 → 590
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:204 → 305
    BTB; BTB/POZ domain
    pfam13465
    Location:779 → 803
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein Strain
Heading Accession and Version

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