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meso18E meso18E [ Drosophila melanogaster (fruit fly) ]

Gene ID: 53448, updated on 4-Jan-2025

Summary

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Official Symbol
meso18Eprovided by FlyBase
Official Full Name
meso18Eprovided by FlyBase
Primary source
FLYBASE:FBgn0040089
Locus tag
Dmel_CG14233
See related
AllianceGenome:FB:FBgn0040089
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-18DEd; CG14233; Dmel\CG14233; Dmeso18E; eso18E; ld26007; Meso18E; Mmeso18E
Summary
Involved in mesoderm development. Is expressed in several structures, including dorsal pharyngeal muscle primordium; embryonic/larval esophageal visceral muscle; head mesoderm; larval muscle cell; and trunk visceral muscle primordium. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

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See meso18E in Genome Data Viewer
Location:
18E2-18E3; 1-64 cM
Exon count:
6
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (19706418..19713045, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (19600451..19607078, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene Cell division cycle 42 Neighboring gene Threonyl-carbamoyl synthesis 4 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44889 Neighboring gene uncharacterized protein Neighboring gene Adaptor Protein complex 1/2, beta subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Dietary Stimuli, Intestinal Bacteria and Peptide Hormones Regulate Female Drosophila Defecation Rate. Kotronarou K, et al. Metabolites, 2023 Feb 12. PMID 36837883, Free PMC Article
  2. A novel Drosophila, mef2-regulated muscle gene isolated in a subtractive hybridization-based molecular screen using small amounts of zygotic mutant RNA. Taylor MV. Dev Biol, 2000 Apr 1. PMID 10720429
  3. Mononuclear muscle cells in Drosophila ovaries revealed by GFP protein traps. Hudson AM, et al. Dev Biol, 2008 Feb 15. PMID 18199432, Free PMC Article
  4. Drosophila miR-9a targets the ECM receptor Dystroglycan to canalize myotendinous junction formation. Yatsenko AS, et al. Dev Cell, 2014 Feb 10. PMID 24525189
  5. Invertebrate myogenesis: looking back to the future of muscle development. Baylies MK, et al. Curr Opin Genet Dev, 2001 Aug. PMID 11448630

See all (31) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

mobile_element

  • Loc: c19711856-19710126 mobile_element_type = transposon:S{}173

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in mesoderm development IEP
Inferred from Expression Pattern
more info
 PubMed 

General protein information

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Preferred Names
meso18E
Names
CG14233-PA
CG14233-PB
CG14233-PC
CG14233-PD
meso18E-PA
meso18E-PB
meso18E-PC
meso18E-PD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    19706418..19713045 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_144358.3 → NP_652615.1  meso18E, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_652615.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9V3Z3
    Related
    FBpp0074581
    Conserved Domains (1) summary
    pfam13837
    Location:23 → 106
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

  2. NM_001298531.1 → NP_001285460.1  meso18E, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285460.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9V3Z3
    Conserved Domains (1) summary
    pfam13837
    Location:23 → 106
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

  3. NM_001298532.1 → NP_001285461.1  meso18E, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285461.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9V3Z3
    Conserved Domains (1) summary
    pfam13837
    Location:23 → 106
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

  4. NM_001169328.2 → NP_001162799.1  meso18E, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001162799.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9V3Z3
    Conserved Domains (1) summary
    pfam13837
    Location:23 → 106
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9V3Z3 Q9V3Z3

Gene LinkOut

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