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c11.1 c11.1 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 53436, updated on 4-Jan-2025

Summary

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Official Symbol
c11.1provided by FlyBase
Official Full Name
c11.1provided by FlyBase
Primary source
FLYBASE:FBgn0040236
Locus tag
Dmel_CG12132
See related
AllianceGenome:FB:FBgn0040236
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
C11.1; CG1213; CG12132; Dmel\CG12132
Summary
Located in Golgi apparatus and late endosome. Is expressed in adult head and organism. Orthologous to several human genes including MROH1 (maestro heat like repeat family member 1). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

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See c11.1 in Genome Data Viewer
Location:
8D4-8D5; 1-27 cM
Exon count:
9
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (9275318..9283117, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (9169351..9177150, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene CXXC finger protein 1 Neighboring gene aladin Neighboring gene lozenge Neighboring gene long non-coding RNA:CR44534

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Yan regulates Lozenge during Drosophila eye development. Behan KJ, et al. Dev Genes Evol, 2002 Jul. PMID 12111211
  2. Alternative splicing removes an Ets interaction domain from Lozenge during Drosophila eye development. Jackson Behan K, et al. Dev Genes Evol, 2005 Aug. PMID 15868204
  3. Genome-wide analysis of nuclear mRNA export pathways in Drosophila. Herold A, et al. EMBO J, 2003 May 15. PMID 12743041, Free PMC Article
  4. Chromosomal elements evolve at different rates in the Drosophila genome. González J, et al. Genetics, 2002 Jul. PMID 12136017, Free PMC Article
  5. Spotted-dick, a zinc-finger protein of Drosophila required for expression of Orc4 and S phase. Page AR, et al. EMBO J, 2005 Dec 21. PMID 16369566, Free PMC Article

See all (35) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in late endosome IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
c11.1
Names
CG12132-PA
CG12132-PB
c11.1-PA
c11.1-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    9275318..9283117 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001298121.1 → NP_001285050.1  c11.1, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285050.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9NHY0, Q9W350

  2. NM_144349.3 → NP_652606.1  c11.1, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_652606.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9NHY0, Q9W350
    Related
    FBpp0071261
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9NHY0 Q9NHY0
Q9W350 Q9W350

Gene LinkOut

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