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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_032982.1 RefSeqGene
- Range
-
4983..9517
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001318496.2 → NP_001305425.1 calcium-binding protein 2 isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) represents the longer transcript and encodes the longer isoform (3).
- Source sequence(s)
-
AF169154, AP001184, BC018476
- UniProtKB/TrEMBL
-
F1T0K2
- Conserved Domains (4) summary
-
- COG5126
Location:78 → 226
- FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
- cd00051
Location:162 → 225
- EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
- pfam13405
Location:88 → 117
- EF-hand_6; EF-hand domain
- pfam13833
Location:133 → 188
- EF-hand_8; EF-hand domain pair
-
NM_016366.3 → NP_057450.2 calcium-binding protein 2 isoform 1
See identical proteins and their annotated locations for NP_057450.2
Status: REVIEWED
- Description
- Transcript Variant: Transcript Variant: This variant (1) uses an alternate splice junction in a coding exon compared to variant 3. The resulting isoform (1) has a shorter and distinct N-terminus compared to isoform 3.
- Source sequence(s)
-
AF169154, AP001184, BC018476
- Consensus CDS
-
CCDS8170.1
- UniProtKB/Swiss-Prot
-
Q9NPB3
- Related
- ENSP00000294288.4, ENST00000294288.5
- Conserved Domains (2) summary
-
- COG5126
Location:62 → 220
- FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
- cd00051
Location:156 → 219
- EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000011.10 Reference GRCh38.p14 Primary Assembly
- Range
-
67518912..67523446 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060935.1 Alternate T2T-CHM13v2.0
- Range
-
67513590..67518124 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_031204.2: Suppressed sequence
- Description
- NM_031204.2: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript.