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TEX2 testis expressed 2 [ Bos taurus (domestic cattle) ]

Gene ID: 513262, updated on 27-Dec-2024

Summary

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Official Symbol
TEX2provided by VGNC
Official Full Name
testis expressed 2provided by VGNC
Primary source
VGNC:VGNC:35763
See related
BGD:BT27729; Ensembl:ENSBTAG00000004723
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See TEX2 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (48368421..48482727, complement)

Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101902037 Neighboring gene small nucleolar RNA SNORD104 Neighboring gene small nucleolar RNA SNORA76 Neighboring gene uncharacterized LOC132343102 Neighboring gene uncharacterized LOC132343101 Neighboring gene platelet and endothelial cell adhesion molecule 1 Neighboring gene uncharacterized LOC112442686 Neighboring gene mast cell immunoglobulin like receptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC148486

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
testis-expressed protein 2
Names
testis expressed sequence 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001101970.2 → NP_001095440.1  testis-expressed protein 2

    Status: PROVISIONAL

    Source sequence(s)
    BC148108
    UniProtKB/TrEMBL
    A6QLW4
    Related
    ENSBTAP00000006196.6, ENSBTAT00000006196.7

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    48368421..48482727 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024980007.2 → XP_024835775.1  testis-expressed protein 2 isoform X2

  2. XM_059877966.1 → XP_059733949.1  testis-expressed protein 2 isoform X1

    UniProtKB/TrEMBL
    F1MJA6

  3. XM_024980008.2 → XP_024835776.1  testis-expressed protein 2 isoform X3

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials