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LINJ_35_0570 conserved hypothetical protein [ Leishmania infantum JPCM5 ]

Gene ID: 5072957, updated on 30-Oct-2024

Summary

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Gene symbol
LINJ_35_0570
Gene description
conserved hypothetical protein
Locus tag
LINJ_35_0570
Gene type
protein coding
RNA name
conserved hypothetical protein
RefSeq status
PROVISIONAL
Organism
Leishmania infantum JPCM5 (strain: JPCM5)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
Orthologs
Leishmania major all
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Genomic context

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Location:
chromosome: 35
Exon count:
1
Sequence:
Chromosome: 35; NC_009419.2 (253605..259979)

Chromosome 35 - NC_009419.2Genomic Context describing neighboring genes Neighboring gene proteophosphoglycan ppg1 Neighboring gene putative phosphatidylinositol-4-phosphate 5-kinase-like Neighboring gene conserved SNF-7-like protein Neighboring gene conserved hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009419.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomic analysis of three Leishmania species that cause diverse human disease. Peacock CS, et al. Nat Genet, 2007 Jul. PMID 17572675, Free PMC Article
  2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
conserved hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009419.2 Reference assembly

    Range
    253605..259979
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001468836.1 → XP_001468873.1  conserved hypothetical protein [Leishmania infantum JPCM5]

    See identical proteins and their annotated locations for XP_001468873.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2K4Z605, A0A381MU81, A0A6L0Y123, A4IAV4
    Conserved Domains (3) summary
    smart00320
    Location:456 → 494
    WD40; WD40 repeats
    PHA03247
    Location:1319 → 1593
    PHA03247; large tegument protein UL36; Provisional
    cl29593
    Location:57 → 189
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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