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Peritrophin-15b Peritrophin-15b [ Drosophila melanogaster (fruit fly) ]

Gene ID: 50432, updated on 9-Dec-2024

Summary

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Official Symbol
Peritrophin-15bprovided by FlyBase
Official Full Name
Peritrophin-15bprovided by FlyBase
Primary source
FLYBASE:FBgn0040958
Locus tag
Dmel_CG31893
See related
AllianceGenome:FB:FBgn0040958
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG13395; CG31893; Dm15b; Dmel\CG31893; Peritrophi-15b; peritrophin-15b
Summary
Predicted to enable chitin binding activity. Predicted to be a structural constituent of peritrophic membrane. Predicted to be located in chitin-based extracellular matrix. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

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See Peritrophin-15b in Genome Data Viewer
Location:
29C1-29C1; 2-32 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (8394446..8394940, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (8394446..8394940, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Accessory gland protein 29AB Neighboring gene lectin-29Ca Neighboring gene antisense RNA:CR45343 Neighboring gene Peritrophin-15a Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Systematic Identification of Microproteins during the Development of Drosophila melanogaster. Wang Z, et al. J Proteome Res, 2022 Apr 1. PMID 35227063
  2. A novel family of chitin-binding proteins from insect type 2 peritrophic matrix. cDNA sequences, chitin binding activity, and cellular localization. Wijffels G, et al. J Biol Chem, 2001 May 4. PMID 11278497
  3. Peritrophic matrix proteins. Tellam RL, et al. Insect Biochem Mol Biol, 1999 Feb. PMID 10196732
  4. Whole-genome expression plasticity across tropical and temperate Drosophila melanogaster populations from Eastern Australia. Levine MT, et al. Mol Biol Evol, 2011 Jan. PMID 20671040, Free PMC Article
  5. Genetic variation in the shape of cold-survival curves in a single fly population suggests potential for selection from climate variability. Teets NM, et al. J Evol Biol, 2018 Apr. PMID 29345010

See all (27) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
  
enables chitin binding ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables structural constituent of peritrophic membrane ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
located_in chitin-based extracellular matrix ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Peritrophin-15b
Names
CG31893-PA
CG31893-PB
CG31893-PC
Dm-peritrophin-15b
Peritrophin-15b-PA
Peritrophin-15b-PB
Peritrophin-15b-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    8394446..8394940 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001273320.2 → NP_001260249.1  Peritrophin-15b, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001260249.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VLL9

  2. NM_001273319.2 → NP_001260248.1  Peritrophin-15b, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001260248.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9PCE2

  3. NM_080243.4 → NP_524982.1  Peritrophin-15b, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524982.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VLL9
    Related
    FBpp0079319
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
M9PCE2 M9PCE2
Q9VLL9 Q9VLL9

Gene LinkOut

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