msi1a musashi RNA binding protein 1a [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: msi1aprovided by ZNC
Official Full Name: musashi RNA binding protein 1aprovided by ZNC
Primary source: ZFIN:ZDB-GENE-050306-36
See related: Ensembl:ENSDARG00000041299 AllianceGenome:ZFIN:ZDB-GENE-050306-36
Gene type: protein coding
RefSeq status: PREDICTED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: msi1; cb676; zgc:110796
Summary: Predicted to enable RNA binding activity. Is expressed in immature eye; nervous system; and neural plate. Orthologous to human MSI1 (musashi RNA binding protein 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 5

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	5	NC_007116.7 (6617401..6620005)
105	previous assembly	GRCz10 (GCF_000002035.5)	5	NC_007116.6 (6054308..6098575)

Chromosome 5 - NC_007116.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help

See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables RNA binding	IEA Inferred from Electronic Annotation more info
enables nucleic acid binding	IEA Inferred from Electronic Annotation more info

General protein information

Go to the top of the page Help

Preferred Names: uncharacterized protein LOC503755

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001013333.1 → NP_001013351.1 uncharacterized protein LOC503755

See identical proteins and their annotated locations for NP_001013351.1

Status: PREDICTED

Source sequence(s)

BC090772

UniProtKB/TrEMBL

A0A8M1N4H6, Q5CZN9

Related

ENSDARP00000060531.3, ENSDART00000060532.4

Conserved Domains (2) summary

COG0724
Location:18 → 92

RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]

cl17169
Location:24 → 92

RRM_SF; RNA recognition motif (RRM) superfamily