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Btf3l6 basic transcription factor 3 like 6 [ Rattus norvegicus (Norway rat) ]

Gene ID: 500914, updated on 14-Nov-2024

Summary

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Official Symbol
Btf3l6provided by RGD
Official Full Name
basic transcription factor 3 like 6provided by RGD
Primary source
RGD:1560568
See related
EnsemblRapid:ENSRNOG00000029243 AllianceGenome:RGD:1560568
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1560568; AABR07058578.1
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Genomic context

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See Btf3l6 in Genome Data Viewer
Location:
7q34
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (117599716..117600530, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (115719756..115720555, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (125496727..125497531, complement)

Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene shisa like 1 Neighboring gene retrotransposon Gag like 6 Neighboring gene U6 spliceosomal RNA Neighboring gene proline rich 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of nascent polypeptide-associated complex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
transcription factor BTF3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086025.1 Reference GRCr8

    Range
    117599716..117600530 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039080627.2 → XP_038936555.1  transcription factor BTF3-like

    UniProtKB/TrEMBL
    A0A0G2K5C5, A6JGE1, M0R5M7
    Related
    ENSRNOP00000073374.3, ENSRNOT00000049445.6
    Conserved Domains (1) summary
    cd22055
    Location:9 → 125
    NAC_BTF3; basal transcription factor BTF3
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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