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IDL2 inflorescence deficient in abscission (IDA)-like 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 5008332, updated on 18-Sep-2024

Summary

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Official Symbol
IDL2
Official Full Name
inflorescence deficient in abscission (IDA)-like 2
Primary source
TAIR:AT5G64667
Locus tag
AT5G64667
See related
Araport:AT5G64667
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
inflorescence deficient in abscission (IDA)-like 2
Summary
Similar to Inflorescence deficient in abscission (IDA). Involved in floral organ abscission.
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Genomic context

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See IDL2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (25850509..25851375)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Ribosomal protein L17 family protein Neighboring gene CYS, MET, PRO, and GLY protein 2 Neighboring gene Ribosomal protein L18e/L15 superfamily protein Neighboring gene mediator-associated protein Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The EPIP peptide of INFLORESCENCE DEFICIENT IN ABSCISSION is sufficient to induce abscission in arabidopsis through the receptor-like kinases HAESA and HAESA-LIKE2. Stenvik GE, et al. Plant Cell, 2008 Jul. PMID 18660431, Free PMC Article
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001085327.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within floral organ abscission IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
inflorescence deficient in abscission (IDA)-like 2
NP_001078796.1
  • inflorescence deficient in abscission (IDA)-like 2 (IDL2); BEST Arabidopsis thaliana protein match is: inflorescence deficient in abscission (IDA)-like 3 (TAIR:AT5G09805.1); Has 22 Blast hits to 22 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    25850509..25851375
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001085327.3 → NP_001078796.1  inflorescence deficient in abscission (IDA)-like 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078796.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q6DUW9
    UniProtKB/TrEMBL
    A0A178U8Z6, A0A5S9YJ56
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6DUW9.1

Gene LinkOut

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Molecular Biology Databases
Research Materials