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OSTLU_18243 hypothetical protein [ Ostreococcus lucimarinus CCE9901 ]

Gene ID: 5005816, updated on 21-Dec-2023

Summary

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Gene symbol
OSTLU_18243
Gene description
hypothetical protein
Locus tag
OSTLU_18243
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Ostreococcus lucimarinus CCE9901 (strain: CCE9901)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
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Genomic context

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See OSTLU_18243 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
1
Sequence:
Chromosome: 15; NC_009369.1 (11160..12203)

Chromosome 15 - NC_009369.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009369.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation. Palenik B, et al. Proc Natl Acad Sci U S A, 2007 May 1. PMID 17460045, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal small subunit assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CURI complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of UTP-C complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009369.1 Reference assembly

    Range
    11160..12203
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001421509.1 → XP_001421546.1  predicted protein [Ostreococcus lucimarinus CCE9901]

    See identical proteins and their annotated locations for XP_001421546.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A4S809
    Conserved Domains (1) summary
    cl15166
    Location:214 → 347
    RRP7_like; RRP7 domain ribosomal RNA-processing protein 7 (Rrp7p), ribosomal RNA-processing protein 7 homolog A (Rrp7A), and similar proteins
Nucleotide Protein
Heading Accession and Version

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