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OSTLU_26876 ABC(membrane) family transporter: toluene tolerance [ Ostreococcus lucimarinus CCE9901 ]

Gene ID: 5004926, updated on 21-Dec-2023

Summary

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Gene symbol
OSTLU_26876
Gene description
ABC(membrane) family transporter: toluene tolerance
Locus tag
OSTLU_26876
Gene type
protein coding
RNA name
ABC(membrane) family transporter: toluene tolerance
RefSeq status
PROVISIONAL
Organism
Ostreococcus lucimarinus CCE9901 (strain: CCE9901)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
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Genomic context

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See OSTLU_26876 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
1
Sequence:
Chromosome: 12; NC_009366.1 (356060..356986)

Chromosome 12 - NC_009366.1Genomic Context describing neighboring genes Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009366.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation. Palenik B, et al. Proc Natl Acad Sci U S A, 2007 May 1. PMID 17460045, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phospholipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ATP-binding cassette (ABC) transporter complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
ABC(membrane) family transporter: toluene tolerance

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009366.1 Reference assembly

    Range
    356060..356986
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001420628.1 → XP_001420665.1  ABC(membrane) family transporter: toluene tolerance [Ostreococcus lucimarinus CCE9901]

    See identical proteins and their annotated locations for XP_001420665.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A4S5T4
    Conserved Domains (2) summary
    PLN03100
    Location:35 → 308
    PLN03100; Permease subunit of ER-derived-lipid transporter; Provisional
    pfam02405
    Location:94 → 304
    MlaE; Permease MlaE
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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