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Gimap7 GTPase, IMAP family member 7 [ Rattus norvegicus (Norway rat) ]

Gene ID: 500113, updated on 27-Nov-2024

Summary

Symbol
Gimap7provided by RGD
Full Name
GTPase, IMAP family member 7provided by RGD
Primary source
RGD:1565750
See related
EnsemblRapid:ENSRNOG00000038740 AllianceGenome:RGD:1565750
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Ian3
Summary
Predicted to enable GTP binding activity; GTPase activity; and protein homodimerization activity. Predicted to be involved in GTP metabolic process. Predicted to be located in lipid droplet. Orthologous to human GIMAP7 (GTPase, IMAP family member 7). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Thymus (RPKM 1182.9), Spleen (RPKM 304.9) and 2 other tissues See more
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Genomic context

See Gimap7 in Genome Data Viewer
Location:
4q24
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (79001416..79005586)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (77670522..77674692)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (78354335..78358505)

Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene GTPase, IMAP family member 4 Neighboring gene GTPase, IMAP family member 6 Neighboring gene GTPase, IMAP family member 1 Neighboring gene GTPase, IMAP family member 5

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General gene information

Clone Names

  • MGC108919

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables GTP binding ISO
Inferred from Sequence Orthology
more info
 
enables GTPase activity ISO
Inferred from Sequence Orthology
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables protein homodimerization activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in GTP metabolic process ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in lipid droplet ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
GTPase, IMAP family member 7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001024328.2NP_001019499.1  GTPase, IMAP family member 7

    See identical proteins and their annotated locations for NP_001019499.1

    Status: VALIDATED

    Source sequence(s)
    BC091210, CV075794
    UniProtKB/TrEMBL
    A0A8I5ZMV6, Q5BK45
    Related
    ENSRNOP00000111143.1, ENSRNOT00000145603.1
    Conserved Domains (1) summary
    cd01852
    Location:9209
    AIG1; AvrRpt2-Induced Gene 1 (AIG1)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086022.1 Reference GRCr8

    Range
    79001416..79005586
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063286508.1XP_063142578.1  GTPase, IMAP family member 7 isoform X1

    UniProtKB/TrEMBL
    A0A8I5ZMV6, Q5BK45
    Related
    ENSRNOP00000079331.1, ENSRNOT00000107044.2