U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Zfp800 zinc finger protein 800 [ Rattus norvegicus (Norway rat) ]

Gene ID: 500057, updated on 4-Jan-2025

Summary

Go to the top of the page Help
Official Symbol
Zfp800provided by RGD
Official Full Name
zinc finger protein 800provided by RGD
Primary source
RGD:1560157
See related
EnsemblRapid:ENSRNOG00000007662 AllianceGenome:RGD:1560157
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1560157
Summary
Predicted to enable DNA binding activity. Predicted to act upstream of or within acinar cell differentiation and endocrine pancreas development. Predicted to be located in nucleus. Orthologous to human ZNF800 (zinc finger protein 800). [provided by Alliance of Genome Resources, Jan 2025]
Expression
Biased expression in Spleen (RPKM 99.0), Thymus (RPKM 97.7) and 9 other tissues See more
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Zfp800 in Genome Data Viewer
Location:
4q22
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (57763789..57977318, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (56798326..56849766, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (55502644..55527039, complement)

Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene glutamate metabotropic receptor 8 Neighboring gene U2 spliceosomal RNA Neighboring gene microRNA 592 Neighboring gene uncharacterized LOC120102248 Neighboring gene H3 histone, family 3C like 2 Neighboring gene U1 spliceosomal RNA Neighboring gene fascin actin-bundling protein 3 Neighboring gene GRIP and coiled-coil domain containing 1 Neighboring gene ARF GTPase 5

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within acinar cell differentiation ISO
Inferred from Sequence Orthology
more info
  
acts_upstream_of_or_within endocrine pancreas development ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
zinc finger protein 800

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001109225.1 → NP_001102695.1  zinc finger protein 800

    See identical proteins and their annotated locations for NP_001102695.1

    Status: PROVISIONAL

    Source sequence(s)
    CH473959
    UniProtKB/TrEMBL
    A0A0G2JY61, A6IEA4, D3ZPQ4
    Conserved Domains (5) summary
    sd00018
    Location:618 → 640
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:488 → 508
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:618 → 640
    zf-C2H2; Zinc finger, C2H2 type
    pfam16622
    Location:355 → 383
    zf-C2H2_11; zinc-finger C2H2-type
    pfam16624
    Location:391 → 485
    zf-C2H2_assoc2; Unstructured region upstream of a zinc-finger

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086022.1 Reference GRCr8

    Range
    57763789..57977318 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063286482.1 → XP_063142552.1  zinc finger protein 800 isoform X1

    UniProtKB/TrEMBL
    A0A0G2JY61

  2. XM_039108103.2 → XP_038964031.1  zinc finger protein 800 isoform X1

    UniProtKB/TrEMBL
    A0A0G2JY61
    Conserved Domains (5) summary
    sd00018
    Location:618 → 640
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:488 → 508
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:618 → 640
    zf-C2H2; Zinc finger, C2H2 type
    pfam16622
    Location:355 → 383
    zf-C2H2_11; zinc-finger C2H2-type
    pfam16624
    Location:391 → 485
    zf-C2H2_assoc2; Unstructured region upstream of a zinc-finger

  3. XM_039108106.2 → XP_038964034.1  zinc finger protein 800 isoform X1

    UniProtKB/TrEMBL
    A0A0G2JY61
    Conserved Domains (5) summary
    sd00018
    Location:618 → 640
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:488 → 508
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:618 → 640
    zf-C2H2; Zinc finger, C2H2 type
    pfam16622
    Location:355 → 383
    zf-C2H2_11; zinc-finger C2H2-type
    pfam16624
    Location:391 → 485
    zf-C2H2_assoc2; Unstructured region upstream of a zinc-finger

  4. XM_039108105.2 → XP_038964033.1  zinc finger protein 800 isoform X1

    UniProtKB/TrEMBL
    A0A0G2JY61
    Conserved Domains (5) summary
    sd00018
    Location:618 → 640
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:488 → 508
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:618 → 640
    zf-C2H2; Zinc finger, C2H2 type
    pfam16622
    Location:355 → 383
    zf-C2H2_11; zinc-finger C2H2-type
    pfam16624
    Location:391 → 485
    zf-C2H2_assoc2; Unstructured region upstream of a zinc-finger

  5. XM_039108104.2 → XP_038964032.1  zinc finger protein 800 isoform X1

    UniProtKB/TrEMBL
    A0A0G2JY61
    Related
    ENSRNOP00000070530.3, ENSRNOT00000087407.3
    Conserved Domains (5) summary
    sd00018
    Location:618 → 640
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:488 → 508
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:618 → 640
    zf-C2H2; Zinc finger, C2H2 type
    pfam16622
    Location:355 → 383
    zf-C2H2_11; zinc-finger C2H2-type
    pfam16624
    Location:391 → 485
    zf-C2H2_assoc2; Unstructured region upstream of a zinc-finger

  6. XM_039108107.2 → XP_038964035.1  zinc finger protein 800 isoform X1

    UniProtKB/TrEMBL
    A0A0G2JY61
    Conserved Domains (5) summary
    sd00018
    Location:618 → 640
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:488 → 508
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:618 → 640
    zf-C2H2; Zinc finger, C2H2 type
    pfam16622
    Location:355 → 383
    zf-C2H2_11; zinc-finger C2H2-type
    pfam16624
    Location:391 → 485
    zf-C2H2_assoc2; Unstructured region upstream of a zinc-finger

  7. XM_063286486.1 → XP_063142556.1  zinc finger protein 800 isoform X2

    UniProtKB/TrEMBL
    A0A0G2JY61, A6IEA4, D3ZPQ4

  8. XM_039108108.2 → XP_038964036.1  zinc finger protein 800 isoform X2

    UniProtKB/TrEMBL
    A0A0G2JY61, A6IEA4, D3ZPQ4
    Conserved Domains (5) summary
    sd00018
    Location:618 → 640
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:488 → 508
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:618 → 640
    zf-C2H2; Zinc finger, C2H2 type
    pfam16622
    Location:355 → 383
    zf-C2H2_11; zinc-finger C2H2-type
    pfam16624
    Location:391 → 485
    zf-C2H2_assoc2; Unstructured region upstream of a zinc-finger

  9. XM_063286484.1 → XP_063142554.1  zinc finger protein 800 isoform X2

    UniProtKB/TrEMBL
    A0A0G2JY61, A6IEA4, D3ZPQ4

  10. XM_063286483.1 → XP_063142553.1  zinc finger protein 800 isoform X2

    UniProtKB/TrEMBL
    A0A0G2JY61, A6IEA4, D3ZPQ4

  11. XM_063286485.1 → XP_063142555.1  zinc finger protein 800 isoform X2

    UniProtKB/TrEMBL
    A0A0G2JY61, A6IEA4, D3ZPQ4
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools