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Gbgt1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) [ Rattus norvegicus (Norway rat) ]

Gene ID: 499764, updated on 9-Dec-2024

Summary

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Official Symbol
Gbgt1provided by RGD
Official Full Name
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group)provided by RGD
Primary source
RGD:1591938
See related
AllianceGenome:RGD:1591938
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable globoside alpha-N-acetylgalactosaminyltransferase activity. Predicted to be involved in globoside metabolic process. Orthologous to human GBGT1 (globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group)). [provided by Alliance of Genome Resources, Dec 2024]
Expression
Low expression observed in reference dataset See more
Orthologs
human mouse all
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Genomic context

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See Gbgt1 in Genome Data Viewer
Location:
3p12
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (32219370..32227737)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (11826131..11829745)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (7076582..7079652)

Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1, regulatory subunit 26 Neighboring gene piercer of microtubule wall 1 Neighboring gene mitochondrial ribosomal protein S2 Neighboring gene ral guanine nucleotide dissociation stimulator Neighboring gene carboxyl ester lipase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Forssman synthetase expression results in diminished shiga toxin susceptibility: a role for glycolipids in determining host-microbe interactions. Elliott SP, et al. Infect Immun, 2003 Nov. PMID 14573676, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables globoside alpha-N-acetylgalactosaminyltransferase activity ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
involved_in globoside metabolic process ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
LOW QUALITY PROTEIN: globoside alpha-1,3-N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086021.1 Reference GRCr8

    Range
    32219370..32227737
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008761694.4 → XP_008759916.3  LOW QUALITY PROTEIN: globoside alpha-1,3-N-acetylgalactosaminyltransferase 1

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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