Tex36 testis expressed 36 [Rattus norvegicus (Norway rat)] - Gene

Summary

Symbol: Tex36provided by RGD
Full Name: testis expressed 36provided by RGD
Primary source: RGD:1566410
See related: EnsemblRapid:ENSRNOG00000026848 AllianceGenome:RGD:1566410
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary: Orthologous to human TEX36 (testis expressed 36). [provided by Alliance of Genome Resources, Jan 2025]
Expression: Biased expression in Testes (RPKM 485.6) and Kidney (RPKM 88.3) See more
Orthologs: human mouse all
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Genomic context

Location:: 1q41

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	1	NC_086019.1 (197820066..197834473, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	1	NC_051336.1 (188390062..188404448, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	1	NC_005100.4 (205615759..205630073, complement)

Chromosome 1 - NC_086019.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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General protein information

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Preferred Names: testis-expressed protein 36

Names: hypothetical gene supported by BC079265; testis-expressed sequence 36 protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001024288.1 → NP_001019459.1 testis-expressed protein 36

See identical proteins and their annotated locations for NP_001019459.1

Status: PROVISIONAL

Source sequence(s)

BC079265

UniProtKB/TrEMBL

A6HX18, Q6AXY6

Related

ENSRNOP00000073474.1, ENSRNOT00000086703.3

Conserved Domains (1) summary

pfam15115
Location:1 → 171

HDNR; Domain of unknown function with conserved HDNR motif

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

NC_086019.1 Reference GRCr8

Range

197820066..197834473 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_039087843.2 → XP_038943771.1 testis-expressed protein 36 isoform X1

Conserved Domains (1) summary

pfam15115
Location:1 → 88

HDNR; Domain of unknown function with conserved HDNR motif