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Sap18-ps1 Sin3A associated protein 18, pseudogene 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 498002, updated on 4-Jan-2025

Summary

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Official Symbol
Sap18-ps1provided by RGD
Official Full Name
Sin3A associated protein 18, pseudogene 1provided by RGD
Primary source
RGD:1561590
See related
AllianceGenome:RGD:1561590
Gene type
pseudo
RefSeq status
INFERRED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1561590
Summary
Orthologous to human SAP18 (Sin3A associated protein 18). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See Sap18-ps1 in Genome Data Viewer
Location:
10q32.1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (87157579..87158204)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (86657350..86657976)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (89635651..89636271)

Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene U2 spliceosomal RNA Neighboring gene U2 spliceosomal RNA Neighboring gene ARF like GTPase 4D Neighboring gene DEAH-box helicase 8 Neighboring gene RNA polymerase II, I and III subunit L, pseudogene 3 Neighboring gene ETS variant transcription factor 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis. Na CH, et al. J Proteome Res, 2012 Sep 7. PMID 22871113, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Other Names

  • histone deacetylase complex subunit SAP18

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_081581.2 

    Range
    101..726
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086028.1 Reference GRCr8

    Range
    87157579..87158204
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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