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Vom1r3 vomeronasal 1 receptor 3 [ Rattus norvegicus (Norway rat) ]

Gene ID: 494237, updated on 9-Dec-2024

Summary

Symbol
Vom1r3provided by RGD
Full Name
vomeronasal 1 receptor 3provided by RGD
Primary source
RGD:1359495
See related
AllianceGenome:RGD:1359495
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
V1re25
Summary
Predicted to enable pheromone receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway; response to pheromone; and sensory perception of chemical stimulus. Predicted to be located in plasma membrane. Orthologous to several human genes including VN1R2 (vomeronasal 1 receptor 2). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See Vom1r3 in Genome Data Viewer
Location:
1q12
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (68036881..68037777)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (59363865..59364761)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (86429262..86430158)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene vomeronasal type-2 receptor 116-like Neighboring gene vomeronasal 1 receptor 2 Neighboring gene vomeronasal 1 receptor 4 Neighboring gene vomeronasal 1 receptor pseudogene 7

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables pheromone receptor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in response to pheromone IEA
Inferred from Electronic Annotation
more info
 
involved_in sensory perception of chemical stimulus IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
vomeronasal 1 receptor 3; vomeronasal type-1 receptor 4
Names
vomernasal 1 receptor Vom1r3
vomeronasal 1 receptor, E25
vomeronasal V1r-type receptor V1re25

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    68036881..68037777
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039097009.1XP_038952937.1  vomeronasal type-1 receptor 4

    UniProtKB/TrEMBL
    A0A8I6AA92
    Conserved Domains (2) summary
    cd14964
    Location:732
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:7297
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001009517.1: Suppressed sequence

    Description
    NM_001009517.1: This RefSeq was suppressed temporarily based on the calculation that the annotated protein was shorter than a protein or proteins from a putative ortholog.