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btg3 B-cell translocation gene 3 [ Danio rerio (zebrafish) ]

Gene ID: 492479, updated on 9-Dec-2024

Summary

Official Symbol
btg3provided by ZNC
Official Full Name
B-cell translocation gene 3provided by ZNC
Primary source
ZFIN:ZDB-GENE-031113-19
See related
Ensembl:ENSDARG00000069065 AllianceGenome:ZFIN:ZDB-GENE-031113-19
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
cb928; zgc:103463
Summary
Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including immature eye; nervous system; pectoral fin bud; pectoral fin musculature; and segmental plate. Orthologous to human BTG3 (BTG anti-proliferation factor 3). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See btg3 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (28370816..28380919, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (28484191..28494294, complement)

Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene peptidyl-tRNA hydrolase 2 Neighboring gene clathrin, heavy chain a (Hc) Neighboring gene uncharacterized LOC101882864 Neighboring gene uncharacterized LOC103911752

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001007351.2NP_001007352.1  protein BTG3 isoform 2

    See identical proteins and their annotated locations for NP_001007352.1

    Status: VALIDATED

    Source sequence(s)
    CR392341, EH477859, EH478391, EH539756
    UniProtKB/TrEMBL
    B2GQU6, Q5U3I9
    Related
    ENSDARP00000090980.2, ENSDART00000100207.3
    Conserved Domains (1) summary
    pfam07742
    Location:1115
    BTG; BTG family
  2. NM_001326706.1NP_001313635.1  protein BTG3 isoform 1

    Status: VALIDATED

    Source sequence(s)
    CR392341, EH477859, EH478391, EH539756, EH593294
    UniProtKB/TrEMBL
    A0A2R8QIP9, A0A8M1P3L6
    Related
    ENSDARP00000144779.1, ENSDART00000183409.1
    Conserved Domains (1) summary
    pfam07742
    Location:1115
    BTG; BTG family
  3. NM_001326707.1NP_001313636.1  protein BTG3 isoform 1

    Status: VALIDATED

    Source sequence(s)
    CR392341, EH477859, EH478391, EH539756
    UniProtKB/TrEMBL
    A0A2R8QIP9, A0A8M1P3L6
    Related
    ENSDARP00000155564.1, ENSDART00000183105.1
    Conserved Domains (1) summary
    pfam07742
    Location:1115
    BTG; BTG family
  4. NM_001326708.1NP_001313637.1  protein BTG3 isoform 1

    Status: VALIDATED

    Source sequence(s)
    CR392341, EH477859, EH478391, EH539756
    UniProtKB/TrEMBL
    A0A2R8QIP9, A0A8M1P3L6
    Related
    ENSDARP00000152879.1, ENSDART00000185392.1
    Conserved Domains (1) summary
    pfam07742
    Location:1115
    BTG; BTG family

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007121.7 Reference GRCz11 Primary Assembly

    Range
    28370816..28380919 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394789.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    110613..120454 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)