U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CG12253 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 47730, updated on 4-Jan-2025

Summary

Go to the top of the page Help
Official Symbol
CG12253provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0026148
Locus tag
Dmel_CG12253
See related
AllianceGenome:FB:FBgn0026148
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BEST:LD08487; Dmel\CG12253; DPLG1; LD08487
Summary
Is expressed in organism. Orthologous to human HARBI1 (harbinger transposase derived 1). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CG12253 in Genome Data Viewer
Location:
32C1-32C1; 2-44 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (10987806..10989241)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (10987806..10989241)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene ATP synthase, subunit G Neighboring gene SCAR Neighboring gene P-element induced wimpy testis Neighboring gene Tubulin tyrosine ligase-like 4A Neighboring gene aubergine Neighboring gene lectin-33A

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A novel class of evolutionarily conserved genes defined by piwi are essential for stem cell self-renewal. Cox DN, et al. Genes Dev, 1998 Dec 1. PMID 9851978, Free PMC Article
  2. PIF-like transposons are common in drosophila and have been repeatedly domesticated to generate new host genes. Casola C, et al. Mol Biol Evol, 2007 Aug. PMID 17556756
  3. The Genomic Basis of Postponed Senescence in Drosophila melanogaster. Carnes MU, et al. PLoS One, 2015. PMID 26378456, Free PMC Article
  4. The genetic basis for variation in olfactory behavior in Drosophila melanogaster. Arya GH, et al. Chem Senses, 2015 May. PMID 25687947, Free PMC Article
  5. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article

See all (26) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein
Names
CG12253-PA
PIF-like gene 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    10987806..10989241
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_143799.3 → NP_652056.2  uncharacterized protein Dmel_CG12253 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_652056.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VKM0
    Related
    FBpp0079738
    Conserved Domains (1) summary
    cl21562
    Location:203 → 329
    DDE_Tnp_4; DDE superfamily endonuclease
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VKM0 Q9VKM0

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools