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Adf1 Adh transcription factor 1 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 47082, updated on 4-Jan-2025

Summary

Official Symbol
Adf1provided by FlyBase
Official Full Name
Adh transcription factor 1provided by FlyBase
Primary source
FLYBASE:FBgn0284249
Locus tag
Dmel_CG15845
See related
AllianceGenome:FB:FBgn0284249
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Adf; ADF; Adf 1; adf-1; Adf-1; adf1; ADF1; CG15845; Dmel\CG15845; l(2)01349; l(2)04065; l(2)k14805; nal
Summary
Enables DNA-binding transcription activator activity, RNA polymerase II-specific and transcription cis-regulatory region binding activity. Involved in several processes, including positive regulation of transcription by RNA polymerase II; regulation of dendrite development; and synapse assembly. Located in nucleus and polytene chromosome interband. Is expressed in several structures, including adult brain; embryonic/larval midgut primordium; ganglia; gut section; and larval internal muscle motor neurons. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See Adf1 in Genome Data Viewer
Location:
42C3-42C3; 2-55 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (6662265..6668085)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (2549770..2555590)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene scrambled Neighboring gene DNA polymerase interacting tpr containing protein of 47kD Neighboring gene long non-coding RNA:CR45128 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

mobile_element

  • Loc: 6664234-6665968 mobile_element_type = transposon:S{}758

Gene Ontology Provided by FlyBase

Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in polytene chromosome interband IDA
Inferred from Direct Assay
more info
PubMed 
part_of transcription regulator complex IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
Adh transcription factor 1
Names
Adf1-PA
Adf1-PB
Adf1-PC
Adf1-PE
CG15845-PA
CG15845-PB
CG15845-PC
CG15845-PE
lethal (2) k14805
nalyot
naylot

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    6662265..6668085
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_165479.2NP_724481.1  Adh transcription factor 1, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_724481.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P05552
    Related
    FBpp0085446
    Conserved Domains (1) summary
    smart00595
    Location:1595
    MADF; subfamily of SANT domain
  2. NM_001273801.1NP_001260730.1  Adh transcription factor 1, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001260730.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4KEJ0
    Conserved Domains (1) summary
    smart00595
    Location:1595
    MADF; subfamily of SANT domain
  3. NM_165480.2NP_724482.1  Adh transcription factor 1, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_724482.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P05552
    Related
    FBpp0085447
    Conserved Domains (1) summary
    smart00595
    Location:1595
    MADF; subfamily of SANT domain
  4. NM_206028.2NP_995750.1  Adh transcription factor 1, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_995750.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P05552, Q0E9N5, Q9V9C4
    UniProtKB/TrEMBL
    C6SUW9
    Conserved Domains (1) summary
    smart00595
    Location:24104
    MADF; subfamily of SANT domain