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scw screw [ Drosophila melanogaster (fruit fly) ]

Gene ID: 46000, updated on 9-Dec-2024

Summary

Official Symbol
scwprovided by FlyBase
Official Full Name
screwprovided by FlyBase
Primary source
FLYBASE:FBgn0005590
Locus tag
Dmel_CG31695
See related
AllianceGenome:FB:FBgn0005590
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:LD30945; CG31695; Dmel\CG31695; DmSCW; l(2)37Ff; l(2)IG76; mor2; Scw; SCW
Summary
Enables protein heterodimerization activity and receptor ligand activity. Involved in several processes, including BMP signaling pathway; amnioserosa formation; and digestive tract mesoderm development. Located in extracellular space. Is expressed in several structures, including anlage in statu nascendi; antennal anlage; central brain anlage; central brain anlage in statu nascendi; and dorsal ectoderm anlage. Human ortholog(s) of this gene implicated in prostate cancer. Orthologous to several human genes including BMP5 (bone morphogenetic protein 5); BMP7 (bone morphogenetic protein 7); and BMP8A (bone morphogenetic protein 8a). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See scw in Genome Data Viewer
Location:
38A1-38A1; 2-54 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (19699379..19700968, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (19699379..19700968, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44978 Neighboring gene Leukocyte-antigen-related-like Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44979 Neighboring gene uncharacterized protein Neighboring gene Nuclear factor Y-box B

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables cytokine activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 
enables protein heterodimerization activity IPI
Inferred from Physical Interaction
more info
PubMed 
enables receptor ligand activity IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular space ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 

General protein information

Preferred Names
screw
Names
CG31695-PA
CG31695-PB
morphological defects 2
scw-PA
scw-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    19699379..19700968 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001299159.1NP_001286088.1  screw, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286088.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P54631, Q8INV8
    UniProtKB/TrEMBL
    X2JB15
    Conserved Domains (2) summary
    smart00204
    Location:300400
    TGFB; Transforming growth factor-beta (TGF-beta) family
    pfam00688
    Location:39254
    TGFb_propeptide; TGF-beta propeptide
  2. NM_080124.5NP_524863.3  screw, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524863.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P54631, Q8INV8
    UniProtKB/TrEMBL
    X2JB15
    Related
    FBpp0080802
    Conserved Domains (2) summary
    smart00204
    Location:300400
    TGFB; Transforming growth factor-beta (TGF-beta) family
    pfam00688
    Location:39254
    TGFb_propeptide; TGF-beta propeptide