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na narrow abdomen [ Drosophila melanogaster (fruit fly) ]

Gene ID: 45338, updated on 9-Dec-2024

Summary

Official Symbol
naprovided by FlyBase
Official Full Name
narrow abdomenprovided by FlyBase
Primary source
FLYBASE:FBgn0002917
Locus tag
Dmel_CG1517
See related
AllianceGenome:FB:FBgn0002917
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
alpha1U; CG1517; Dma1U; Dmalpha1U; Dmel\CG1517; har; har 38; har 85; har38; har85; harA; Na; NA; NALCN
Summary
Enables monoatomic ion channel activity. Involved in several processes, including locomotor rhythm; response to anesthetic; and sensory perception of touch. Located in axon terminus and neuronal cell body. Part of cation channel complex. Is expressed in adult head; adult optic lobe; ellipsoid body; spermatozoon; and supraesophageal ganglion. Human ortholog(s) of this gene implicated in congenital limbs-face contractures-hypotonia-developmental delay syndrome. Orthologous to human NALCN (sodium leak channel, non-selective). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

Location:
12E6-12E7; 1-48 cM
Exon count:
16
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (14266367..14277416)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (14160400..14171449)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR46473 Neighboring gene mushroom body defect Neighboring gene uncharacterized protein Neighboring gene Tyrosine aminotransferase Neighboring gene uncharacterized protein Neighboring gene Mucin 12Ea Neighboring gene long non-coding RNA:CR44963 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables monoatomic cation channel activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables monoatomic cation channel activity IEA
Inferred from Electronic Annotation
more info
 
enables monoatomic ion channel activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
Process Evidence Code Pubs
involved_in adult locomotory behavior IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in circadian behavior IDA
Inferred from Direct Assay
more info
PubMed 
involved_in locomotor rhythm IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of synaptic transmission, GABAergic IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of synaptic transmission, cholinergic IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of circadian rhythm IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in response to anesthetic IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in rhythmic behavior IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in sensory perception of touch IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in social behavior IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in axon terminus IDA
Inferred from Direct Assay
more info
PubMed 
part_of cation channel complex IPI
Inferred from Physical Interaction
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in neuronal cell body IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
narrow abdomen
Names
CG1517-PF
CG1517-PG
NARROW ABDOMEN
halothane-resistant
na-PF
na-PG

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    14266367..14277416
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001103511.3NP_001096981.2  narrow abdomen, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001096981.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8JUW5, Q8I877
    Conserved Domains (1) summary
    pfam00520
    Location:15711793
    Ion_trans; Ion transport protein
  2. NM_167401.3NP_727772.3  narrow abdomen, isoform G [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_727772.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8I877, R9PY25
    Conserved Domains (1) summary
    pfam00520
    Location:15621784
    Ion_trans; Ion transport protein