U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

eif1axa eukaryotic translation initiation factor 1A X-linked a [ Danio rerio (zebrafish) ]

Gene ID: 450062, updated on 9-Dec-2024

Summary

Official Symbol
eif1axaprovided by ZNC
Official Full Name
eukaryotic translation initiation factor 1A X-linked aprovided by ZNC
Primary source
ZFIN:ZDB-GENE-041010-185
See related
Ensembl:ENSDARG00000029003 AllianceGenome:ZFIN:ZDB-GENE-041010-185
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
eif1ax; zgc:101670
Summary
Predicted to enable translation initiation factor activity. Predicted to be involved in translational initiation. Predicted to act upstream of or within translation. Predicted to be active in cytoplasm. Orthologous to several human genes including EIF1AX (eukaryotic translation initiation factor 1A X-linked). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See eif1axa in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (24002598..24009104, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (23498798..23505304, complement)

Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene chromo domain-containing protein cec-1-like Neighboring gene MAP7 domain containing 2a Neighboring gene ribosomal protein S6 kinase a, polypeptide 3a Neighboring gene pyruvate dehydrogenase E1 subunit alpha 1a

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables translation initiation factor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within translation IEA
Inferred from Electronic Annotation
more info
 
involved_in translational initiation IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within translational initiation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
eukaryotic translation initiation factor 1A X-linked a

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001006082.2NP_001006082.1  eukaryotic translation initiation factor 1A X-linked a

    See identical proteins and their annotated locations for NP_001006082.1

    Status: PROVISIONAL

    Source sequence(s)
    BC083238
    UniProtKB/TrEMBL
    B2GP65, Q5XJR0
    Related
    ENSDARP00000066644.4, ENSDART00000066645.5
    Conserved Domains (1) summary
    PTZ00329
    Location:1144
    PTZ00329; eukaryotic translation initiation factor 1A; Provisional

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007116.7 Reference GRCz11 Primary Assembly

    Range
    24002598..24009104 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394575.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    8329..14835 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)